MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4085_ses-1_T1w.
  • Date and time: 2022-11-03, 17:15.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.45854635741735367
cnr2.7667355369279694
efc0.5751033739810181
fber1525.87890625
fwhmavg4.323303333333333
fwhmx4.15979
fwhmy4.94796
fwhmz3.86216
icvscsf0.2125405053971723
icvsgm0.4130051887140179
icvswm0.37445430588880974
inumed1.6477115154266357
inurange0.7018443465232846
qi10.0
qi20.009218821166161151
rpvecsf23.843232897140204
rpvegm12.502648134858964
rpvewm16.182543217732526
sizex176
sizey256
sizez256
snrcsf3.8284918131151824
snrgm11.665235904387226
snrtotal12.759239031351028
snrwm22.78398937655067
snrdcsf36.07046302098914
snrdgm79.52464461335641
snrdtotal72.61369309336317
snrdwm102.24597164574395
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk4.6021413851593165
summarybgmad6.407900941998147
summarybgmean15.769810015766737
summarybgmedian12.687347710132599
summarybgn2418628.0
summarybgp054.182642102241516
summarybgp9533.04287260770798
summarybgstdv8.91999481422634
summarycsfk6.85589194156932
summarycsfmad74.93109972497832
summarycsfmean371.4403697889654
summarycsfmedian352.8058613240719
summarycsfn41898.0
summarycsfp05256.8142250776291
summarycsfp95549.4702074363829
summarycsfstdv92.15160126386714
summarygmk0.6503467308190478
summarygmmad61.80523811798213
summarygmmean781.7184345995564
summarygmmedian777.832009613514
summarygmn16655.0
summarygmp05679.2610774040222
summarygmp95898.3827260702848
summarygmstdv66.67749065102545
summarywmk0.6784376862605472
summarywmmad40.1010575079884
summarywmmean1000.5395689755886
summarywmmedian1000.0697266459465
summarywmn220755.0
summarywmp05928.4768359959126
summarywmp951073.8236490488052
summarywmstdv43.89343082122237
tpmoverlapcsf0.1682860106229782
tpmoverlapgm0.44169601798057556
tpmoverlapwm0.4935213625431061
wm2max0.5231820599536342
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime14:16:49.575000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.0127894, 0.990219, 0.138937, 0.0903428, 0.139524, -0.986089]
ImageOrientationTextSag>Tra(-5.2)>Cor(-0.0)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.259
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0333192
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber19
ShimSetting[2654, 5464, -7449, 361, -112, -931, 207, -183]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp247.824
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sumfbeea69c6f11ded2b5320c0365efd25c
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.